Core related publications/applications
- Publication links in green correspond to core staff's publications
- Publication links in blue correspond to core user's publications
Phosphorylation/ Acetylation and other post translational modifications (PTMs) related
Rangasamy, V., Mishra, R., Sondarva, G., Das, S., Lee, T. H., Bakowska, J. C., Tzivion, G., Malter, J. S., Rana, B., Lu, K. P., Kanthasamy, A., &: Rana, A. 2012
Mixed-lineage kinase 3 phosphorylates prolyl-isomerase Pin1 to regulate its nuclear translocation and cellular function
Proc Natl Acad Sci U S A, 109(21): 8149-8154Ganguly, A., Bhattacharya, R., & Cabral, F. 2012
Control of MCAK degradation and removal from centromeres
Cytoskeleton (Hoboken), 69(5): 303-311Lu, H., Wang, X., Li, T., Urvalek, A. M., Yu, L., Li, J., Zhu, J., Lin, Q., Peng, X., & Zhao, J. 2011
Identification of poly (ADP-ribose) polymerase-1 (PARP-1) as a novel Kruppel-like factor 8-interacting and -regulating protein
J Biol Chem, 286(23): 20335-20344Urvalek, A. M., Lu, H., Wang, X., Li, T., Yu, L., Zhu, J., Lin, Q., &: Zhao, J. 2011
Regulation of the oncoprotein KLF8 by a switch between acetylation and sumoylation
Am J Transl Res, 3(2): 121-132Flott, S., Kwon, Y., Pigli, Y. Z., Rice, P. A., Sung, P., & Jackson, S. P. 2011
Regulation of Rad51 function by phosphorylation
EMBO Rep, 12(8): 833-839Xu, D., Yao, Y., Lu, L., Costa, M., & Dai, W. 2010
Plk3 functions as an essential component of the hypoxia regulatory pathway by direct phosphorylation of HIF-1alpha
J Biol Chem, 285(50): 38944-38950Xu, D., Yao, Y., Jiang, X., Lu, L., & Dai, W. 2010
Regulation of PTEN stability and activity by Plk3
J Biol Chem, 285(51): 39935-39942Martinez-Rucobo, F. W., Eckhardt-Strelau, L., & Terwisscha van Scheltinga, A. C. 2009
Yeast chitin synthase 2 activity is modulated by proteolysis and phosphorylation
Biochem J, 417(2): 547-554Ross, J. A., Nagy, Z. S., & Kirken, R. A. 2008
The PHB1/2 phosphocomplex is required for mitochondrial homeostasis and survival of human T cells
J Biol Chem, 283(8): 4699-4713Burz, D. S., & Shekhtman, A. 2008
In-cell biochemistry using NMR spectroscopy
PLoS One, 3(7): e2571Zheng, X. D., Lee, R. T., Wang, Y. M., Lin, Q. S., & Wang, Y. 2007
Phosphorylation of Rga2, a Cdc42 GAP, by CDK/Hgc1 is crucial for Candida albicans hyphal growth
EMBO J, 26(16): 3760-3769
Protein expression profiling including iTRAQ and ICAT quantitative proteomics and MudPIT
Dyavaiah, M., Rooney, J. P., Chittur, S. V., Lin, Q., & Begley, T. J. 2011
Autophagy-dependent regulation of the DNA damage response protein ribonucleotide reductase 1
Mol Cancer Res, 9(4): 462-475Wei, Z., Hu, W., Lin, Q., Cheng, X., Tong, M., Zhu, L., Chen, R., & He, G. 2009
Understanding rice plant resistance to the Brown Planthopper (Nilaparvata lugens): a proteomic approach
Proteomics, 9(10): 2798-2808Gong, Y., Lippa, C. F., Zhu, J., Lin, Q., & Rosso, A. L. 2009
Disruption of glutamate receptors at Shank-postsynaptic platform in Alzheimer's disease
Brain Res, 1292: 191-198Luo, J., Ning, T., Sun, Y., Zhu, J., Zhu, Y., Lin, Q., & Yang, D. 2009
Proteomic analysis of rice endosperm cells in response to expression of hGM-CSF
J Proteome Res, 8(2): 829-837McCutcheon, J. P., McDonald, B. R., & Moran, N. A. 2009
Convergent evolution of metabolic roles in bacterial co-symbionts of insects
Proc Natl Acad Sci U S A, 106(36): 15394-15399McCutcheon, J. P., McDonald, B. R., & Moran, N. A. 2009
Origin of an alternative genetic code in the extremely small and GC-rich genome of a bacterial symbiont
PLoS Genet., 5(7): e1000565Degnan, P. H., Yu, Y., Sisneros, N., Wing, R. A., & Moran, N. A. 2009
Hamiltonella defensa, genome evolution of protective bacterial endosymbiont from pathogenic ancestors
Proc Natl Acad Sci U S A, 106(22): 9063-9068Klees, R. F., Salasznyk, R. M., Vandenberg, S., Bennett, K., & Plopper, G. E. 2007
Laminin-5 activates extracellular matrix production and osteogenic gene focusing in human mesenchymal stem cells
Matrix Biol., 26(2): 106-114Bennett, K. P., Bergeron, C., Acar, E., Klees, R. F., Vandenberg, S. L., Yener, B., & Plopper, G. E. 2007
Proteomics reveals multiple routes to the osteogenic phenotype in mesenchymal stem cells
BMC Genomics, 8: 380Snelling, W. J., Lin, Q., Moore, J. E., Millar, B. C., Tosini, F., Pozio, E., Dooley, J. S., & Lowery, C. J. 2007
Proteomics analysis and protein expression during sporozoite excystation of Cryptosporidium parvum (Coccidia, Apicomplexa)
Mol Cell Proteomics, 6(2): 346-355
Protein structural analysis and identification
He, Y., Ning, T., Xie, T., Qiu, Q., Zhang, L., Sun, Y., Jiang, D., Fu, K., Yin, F., Zhang, W., Shen, L., Wang, H., Li, J., Lin, Q., Li, H., Zhu, Y., & Yang, D. 2011
Large-scale production of functional human serum albumin from transgenic rice seeds
Proc Natl Acad Sci U S A, 108(47): 19078-19083Xu, H. Z., Huang, Y., Wu, Y. L., Zhao, Y., Xiao, W. L., Lin, Q. S., Sun, H. D., Dai, W., & Chen, G. Q. 2010
Pharicin A, a novel natural ent-kaurene diterpenoid, induces mitotic arrest and mitotic catastrophe of cancer cells by interfering with BubR1 function
Cell Cycle, 9(14): 2897-2907Xia, K., Manning, M., Hesham, H., Lin, Q., Bystroff, C., & Colon, W. 2007
Identifying the subproteome of kinetically stable proteins via diagonal 2D SDS/PAGE
Proc Natl Acad Sci U S A, 104(44): 17329-17334Ansong, C., Miles, S. M., & Fay, P. J. 2006
Epitope mapping factor VIII A2 domain by affinity-directed mass spectrometry: residues 497-510 and 584-593 comprise a discontinuous epitope for the monoclonal antibody R8B12
J Thromb Haemost, 4(4): 842-847Tuo, W., Fetterer, R., Jenkins, M., & Dubey, J. P. 2005
Identification and characterization of Neospora caninum cyclophilin that elicits gamma interferon production
Infect Immun, 73(8): 5093-5100Thyagarajan, A., & Szaro, B. G. 2004
Phylogenetically conserved binding of specific K homology domain proteins to the 3´-untranslated region of the vertebrate middle neurofilament mRNA
J Biol Chem, 279(48): 49680-49688
Intact Protein/DNA/RNA Molecular Weight Measurement
Ghosh, K. S., Pande, A., & Pande, J. 2011
Binding of gamma-crystallin substrate prevents the binding of copper and zinc ions to the molecular chaperone alpha-crystallin
Biochemistry, 50(16): 3279-3281Banerjee, P. R., Pande, A., Patrosz, J., Thurston, G. M., & Pande, J. 2010
Cataract-associated mutant E107A of human gammaD-crystallin shows increased attraction to alpha-crystallin and enhanced light scattering
Proc Natl Acad Sci U S A, 108(2): 574-579Pande, A., Ghosh, K. S., Banerjee, P. R., & Pande, J. 2010
Increase in surface hydrophobicity of the cataract-associated P23T mutant of human gammaD-crystallin is responsible for its dramatically lower, retrograde solubility
Biochemistry, 49(29): 6122-6129Pande, A., Gillot, D., & Pande, J. 2009
The cataract-associated R14C mutant of human gamma D-crystallin shows a variety of intermolecular disulfide cross-links: a Raman spectroscopic study
Biochemistry, 48(22): 4937-4945Huang, Z., Pei, W., Han, Y., Jayaseelan, S., Shekhtman, A., Shi, H., & Niu, L. 2009
One RNA aptamer sequence, two structures: a collaborating pair that inhibits AMPA receptors
Nucleic Acids Res, 37(12): 4022-4032
VP-ITC
Simmons, T. J., Hashim, D., Vajtai, R., & Ajayan, P. M. 2007
Large area-aligned arrays from direct deposition of single-wall carbon nanotube inks
J Am Chem Soc, 129(33): 10088-10089
Others
Xu, H. Z., Huang, Y., Wu, Y. L., Zhao, Y., Xiao, W. L., Lin, Q. S., Sun, H. D., Dai, W., & Chen, G. Q. 2010
Pharicin A, a novel natural ent-kaurene diterpenoid, induces mitotic arrest and mitotic catastrophe of cancer cells by interfering with BubR1 function
Cell Cycle, 9(14): 2897-2907Hulse, R. E., Swenson, W. G., Kunkler, P. E., White, D. M., & Kraig, R. P. 2008
Monomeric IgG is neuroprotective via enhancing microglial recycling endocytosis and TNF-alpha
J Neurosci, 28(47): 12199-12211Cismasiu, V. B., Adamo, K., Gecewicz, J., Duque, J., Lin, Q., & Avram, D. 2005
BCL11B functionally associates with the NuRD complex in T lymphocytes to repress targeted promoter
Oncogene, 24(45): 6753-6764Yoon, D. S., Han, Y., Stark, T. M., Haber, J. C., Gregg, B. T., & Stankovich, S. B. 2004
Efficient synthesis of 4-aminoquinazoline and thieno[3,2-d]pyrimidin–4–ylamine derivatives by microwave irradiation
Org Lett, 6(25): 4775-4778Lin, Q., Keller, R. S., Weaver, B., & Zisman, L. S. 2004
Interaction of ACE2 and integrin beta1 in failing human heart
Biochim Biophys Acta, 1689(3): 175-178Zisman, L. S., Keller, R. S., Weaver, B., Lin, Q., Speth, R., Bristow, M. R., & Canver, C. C. 2003
Increased angiotensin–&p(1-7)–forming activity in failing human heart ventricles: evidence for upregulation of the angiotensin–converting enzyme Homologue ACE2
Circulation, 108(14): 1707-1712Lin, Q., Higgs, H. N., & Glomset, J. A. 2000
Membrane lipids have multiple effects on interfacial catalysis by a phosphatidic acid–preferring phospholipase A1 from bovine testis
Biochemistry, 39(31): 9335-9344
Technical Notes
Presentations