DNA-Drug Interaction Measurements Using Surface Plasmon Resonance
Gerlinde Bischoff, Robert
Bischoff, Eckhard Birch-Hirschfeld, Ulrich Gromann, Sabine Landau, Walter-Vesely
Meister, Sergio de A. Bambirra, Christian Bohley and Siegried Hoffman 187-203
1H NMR Studies of the Bis-Intercalation of a Homodimeric
Oxazole Yellow Dye in DNA Oligonucleotides
Franci Johansen and Jens
Peter Jacobsen 205-222
Molecular Dynamics Simulation of Interaction of Histone-like Protein
of Mycobacterium Tuberculosis (Hlpmt) and Histone of Clostridium Pasteurianum
(DBHclopa) with 35 Based GC Rich U-bend DNA
V. Kothekar, K. Ratha
and H.K. Prasad 223-235
Role of Hydrogen Bonds in Protein-DNA Recognition: A Comparison of Generalized
Born and Finite Difference Poisson-Boltzmann Solvation Treatments
S.B. Dixit and B. Jayaram
237-242
The Interaction of Zinc(II) Ions with Antiparallel-Stranded d(GA)n DNA Homoduplexes
Miguel Ortiz-Lomardía,
Emilio Jiménez-García, Ivan García-Bassets and Fernando
Azorin 243-251
Theoretical Studies Employing an Ab Initio and Molecular Modeling
Combination Method on the DNA Binding of Bis-Benzimidazoles Designed for
Bioreductive Actvation
Anne-Marie Sapse and J.
William Lown 253-263
Molecular Dynamics and Continuum Solvent Studies of the Stability of
PolyG-PolyC and PolyA-PolyT DNA Duplexes in Solution
Thomas E. Cheatham, III,
Jayashree Srinivasan, David A. Case and Peter A. Kollman 265-280
Characterization of Low-Salt and High-Salt Conformation of Poly(dI-dC)
by Hydrogen-Deuterium Exchange Kinetics: A Classical Raman Spectroscopy
Study
G. Fabriciova, P. Miskovsky,
D. Jancura and V. Lisy 281-288
Monte Carlo Simulation of DNA Fragment Hydration in the Presence of Alkaline
Cations Using Novel Atom-Atom Potential Functions
Alexander V. Teplukhin,
George G. Malenkov and Valery I. Poltev 289-300
DNA Structure and Fuctuations Sensed From a 1.1ns Molecular Dynamics
Trajectory of a Fully Charged Zif268-DNA Complex in Water
G. Roxström, I. Velázquez,
M. Paulino and O. Tapia 301-312
Stereochemistry of 2',5' Nucleic Acids and Their Constituents
B.J. Premraj and N. Yathindra
313-328
Comparison of Experimental to MELTSIM Calculated DNA Melting of the (A+T)
Rich Dictyostelium Discoideum Genome: Denaturation Maps Distinguish
Exons From Introns
Kenneth A. Marx, Iman
Q. Assil, J.W. Bizzaro and R.D. Blake 329-339
Sequence Periodicity in Complete Genomes of Archaea Suggests Positive
Supercoiling
Hanspeter Herzel, Olaf
Weiss and Edward N. Trifonov 341-345
A Peptide Inhibitor of HIV-1 Reverse Transcriptase Using alpha, beta-
Dehydro Residues: A Structure-Based Computer Model
Gita Subba Rao, Sarika
Kataria and Mohd. Imran Siddiqui 347-354
Tertiary Contacts in alpha-Lactalbumin at pH 7 and pH 2: A Molecular
Dynamics Study
Lynne Reed Murphy, Naiqi
Li, Jean Baum and Ronald M. Levy 355-365
Patterns of Hydration in Crystalline Collagen Peptides
Rachel Z. Kramer and
Helen M. Berman 367-380
Reduced Protein Models and their Application to the Protein Folding Problem
Jeffrey Skolnick, Andrzej
Kolinski and Angel R. Ortiz 381-396
Native Protein Fluctuations: The Conformational-Motion Temperature and
the Inverse Correlation of Protein Flexibility with Protein Stability
Karen E.S. Tang and Ken
A. Dill 397-411
Dynamics of Protein-Protein Docking: Cytochrome c and Cytochrome c Peroxidase
Revisited
Gabriel Castro, Charles
A. Boswell and Scott H. Northrup 413-424
Development of ETB Selective Agonists: Solution
Structure of a Linear Endothelin-1 Analogue, ET-1 [Cys(Acm)1,15,
Ala3, Leu7, dAsp8,
Aib11]
Chandralal M. Hewage,
Lu Jiang, John A. Parkinson, Robert Ramage and Ian H. Sadler 425-435
Computational Analysis of the Thermal Stability in Thioredoxins: A Molecular
Dynamics Approach
Emilia M. Pedone, Simonetta
Bartolucci, Mosè Rossi and Michele Saviano 437-446
Theory of Hydrophobic Interactions
Harold A. Scheraga 447-460
Counterion Condensation Revisited
Gerald S. Manning and
Jolly Ray 461-476
Thermal Excitaions of Hydrated Macromolecules: The Effects of Hydration
on the Mössbauer Absorption and Scattering Spectra
V. Lisy, T.Yu. Tchesskaya
and A.V. Zatovsky 477-485