Journal of Biomolecular Structure and Dynamics

Volume 15, Issue Number 2, October 1997

CONTENTS

• Use of Chemically Modified Nucleotides to Determine a 62-Nucleotide RNA Crystal Structure: A Survey of Phosphorothioates, Br, Pt and Hg
  Carl C. Correll, Betty Freeborn, Peter B. Moore and Thomas A. Steitz 165-172
  
• Correlation of Hydrophobicity and Packing in A-DNA Oligonucleotides
  M. Sundaralingam and R. Biswas 173-176
  
• The SRY Cantilever Motif Discriminates Between Sequence- and Structure-Specific DNA Recognition: Alanine Mutagenesis of an HMG Box
  Michael A. Weiss, Etsuji Ukiyama and Chih-Yen King 177-184
  
• Structure of an Anti-HIV-1 Hammerhead Ribozyme Complex with a 17-mer DNA Substrate Analog of HIV-1 gag RNA and a Mechanism for the Cleavage Reaction: 750 MHz NMR and Computer Experiments
  Rajendra P. Ojha, Madan M. Dhingra, Mukti H. Sarma, Yash P. Myer, Robert F. Setlik, Masayuki Shibata, A. Latif Kazim, Rick L. Ornstein, Robert Rein, Christopher J. Turner and Ramaswamy H. Sarma 185-215
  
• Variability Analysis of HIV-1 gp120 V3 Region: I. Point Estimators for the Amino Acid Distribution Characteristics
  Michael Yu. Shchelkanov, Alex N. Yudin, Alex V. Antonov, Nicole S. Starikov, Alexander A. Vedenov and Edward V. Karamov 217-229
  
• Variability Analysis of HIV-1 gp120 V3 Region: II. Hierarchy of Taxons
  Michael Yu. Shchelkanov, Alex N. Yudin, Alex V. Antonov, Lev A. Soinov, Vadim V. Zalunin, Alexander A. Vedenov and Edward V. Karamov 231-241
  
• Single-Strand-Preferring RNases Degrade Double-Stranded RNAs by Destabilizing its Secondary Structure
  G. Yakovlev, G. P. Moiseyev, S. Sorrentino, R. De Prisco and M. Libonati 243-250
  
• Thermodynamic Cycle Between DNA and RNA Constituents for Conformation of the Sugar Ring from Nuclear Magnetic Resonance Study
  Mieczyslaw Remin 251-264
  
• Curvature and Sequence Analysis of Eukaryotic Promoters
  Tanja Schätz and Jörg Langowski 265-275
  
• An Improved Method for the Rapid Assessment of DNA Bending by Small Molecules
  Aaron A. Salzberg and Peter C. Dedon 277-284
  
• Structure of Poly d(AI)·Poly d(CT) in Two Different Packing Arrangements
  Rengaswami Chandrasekaran, Akella Radha and Hye-Shin Park 285-305
  
• Structural Studies by High-Field NMR Spectroscopy of a Binary-Addressed Complementary Oligonucleotide System Juxtaposing Pyrene and Perfluoro-Azide Units
  Elena V. Bichenkova, Debora S. Marks, Sergei G. Lokhov, Michail I. Dobrikov, Valentin V. Vlassov and Kenneth T. Douglas 307-320
  
• Dynamic Bis-Intercalation of a Homodimeric Thiazole Orange Dye in DNA: Evidence of Intercalator Creeping
  Jef Faridi, Katrine E. Nielsen, Paul C. Stein and Jens Peter Jacobsen 321-332
  
• Sequence-Independent Recombination Triple Helices: A Molecular Dynamics Study
  M. Ravi Kiran and Manju Bansal 333-345
  
• Protein-Nucleic Acid Recognition: Simulation of Base and "Model" Amino Acids Complexes in DMSO by the Monte Carlo Method
  Victor I. Danilov, Oleg N. Slyusarchuk, Valery I. Poltev and James L. Alderfer 347-355
  
• Search for Rigid Sub Domains in DNA from Molecular Dynamics Simulations
  F. Gaudin, G. Lancelot and D. Genest 357-367
  
• Cooperative Interactions of the Oligodeoxyribonucleotides on the Complementary Template. The Influence of Chemical Groups and Mismatched Nucleotides at the 5'- and 3'-ends of Oligonucleotides on the Parameters of Cooperativity.
  Abdussalam Adeenah-Zadah, Dmitri G. Knorre and Olga S. Fedorova 369-380
  
• Dielectric Relaxation, Molecular Motion and Interprotein Interactions in Myoglobin Solution
  I. V. Ermolina, I. N. Ivoylov and V. D. Fedotov 381-392
  
• Modeling of in vivo Proteolytic Degradation of Hemoglobin
  Alexei N. Nekrasov, Elena E. Lexikova and Andrey A. Karelin 393-399
  
• Aromatic-Aromatic Ring Interaction Revisited with Model Compounds of Wilcox
  Tan Ren, Yonghao Jin, Kwang S. Kim and Dong H. Kim 401-405
  
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